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Coot displays electron density maps and atomic models and allows model manipulations such as idealization, real space refinement, manual rotation/translation, rigid-body fitting, ligand search, solvation, mutations, rotamers, and Ramachandran idealization. The software is designed to be easy-to-learn for novice users, achieved by ensuring that ...
This is a list of free and open-source software for geological data handling and interpretation. The list is split into broad categories, depending on the intended use of the software and its scope of functionality. Notice that 'free and open-source' requires that the source code is available and users are given a free software license.
The Birch reduction is an organic reaction that is used to convert arenes to 1,4-cyclohexadienes.The reaction is named after the Australian chemist Arthur Birch and involves the organic reduction of aromatic rings in an amine solvent (traditionally liquid ammonia) with an alkali metal (traditionally sodium) and a proton source (traditionally an alcohol).
Where is the standard reduction potential of the half-reaction expressed versus the standard reduction potential of hydrogen. For standard conditions in electrochemistry (T = 25 °C, P = 1 atm and all concentrations being fixed at 1 mol/L, or 1 M) the standard reduction potential of hydrogen E red H+ ⊖ {\displaystyle E_{\text{red H+ ...
In electrochemistry, the Nernst equation is a chemical thermodynamical relationship that permits the calculation of the reduction potential of a reaction (half-cell or full cell reaction) from the standard electrode potential, absolute temperature, the number of electrons involved in the redox reaction, and activities (often approximated by concentrations) of the chemical species undergoing ...
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The electrochemical window (EW) is an important concept in organic electrosynthesis and design of batteries, especially organic batteries. [5] This is because at higher voltage (greater than 4.0 V) organic electrolytes decompose and interferes with the oxidation and reduction of the organic cathode/anode materials.
Fig. 3 Energy diagram for Electron Transfer including inner and outer sphere reorganization and electronic coupling: The vertical axis is the free energy, and the horizontal axis is the "reaction coordinate" – a simplified axis representing the motion of all the atomic nuclei (including solvent reorganization)