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In statistics and data mining, X-means clustering is a variation of k-means clustering that refines cluster assignments by repeatedly attempting subdivision, and keeping the best resulting splits, until a criterion such as the Akaike information criterion (AIC) or Bayesian information criterion (BIC) is reached.
The term "k-means" was first used by James MacQueen in 1967, [2] though the idea goes back to Hugo Steinhaus in 1956. [3]The standard algorithm was first proposed by Stuart Lloyd of Bell Labs in 1957 as a technique for pulse-code modulation, although it was not published as a journal article until 1982. [4]
Variations of k-means often include such optimizations as choosing the best of multiple runs, but also restricting the centroids to members of the data set (k-medoids), choosing medians (k-medians clustering), choosing the initial centers less randomly (k-means++) or allowing a fuzzy cluster assignment (fuzzy c-means). Most k-means-type ...
Similar to other clustering evaluation metrics such as Silhouette score, the CH index can be used to find the optimal number of clusters k in algorithms like k-means, where the value of k is not known a priori. This can be done by following these steps: Perform clustering for different values of k. Compute the CH index for each clustering result.
In data mining, k-means++ [1] [2] is an algorithm for choosing the initial values (or "seeds") for the k-means clustering algorithm. It was proposed in 2007 by David Arthur and Sergei Vassilvitskii, as an approximation algorithm for the NP-hard k-means problem—a way of avoiding the sometimes poor clusterings found by the standard k-means algorithm.
Then, at each of the n measured points, the weight of the original value on the linear combination that makes up the predicted value is just 1/k. Thus, the trace of the hat matrix is n/k. Thus the smooth costs n/k effective degrees of freedom. As another example, consider the existence of nearly duplicated observations.
Although the K a /K s ratio is a good indicator of selective pressure at the sequence level, evolutionary change can often take place in the regulatory region of a gene which affects the level, timing or location of gene expression. K a /K s analysis will not detect such change. It will only calculate selective pressure within protein coding ...
In clustering, this means one should choose a number of clusters so that adding another cluster doesn't give much better modeling of the data. The intuition is that increasing the number of clusters will naturally improve the fit (explain more of the variation), since there are more parameters (more clusters) to use, but that at some point this ...