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One can use either the direct-format or annotated-format for storing higher dimensional arrays, as natively supported by both JSON/UBJSON, but the benefit of using the annotated format for text-based JData, and the packed-array optimized format for binary-JData becomes more advantageous due to faster processing speed.
JSON is a lightweight plain-text alternative to XML, and is also commonly used for client-server communication in web applications. JSON is based on JavaScript syntax, but is independent of JavaScript and supported in many other programming languages. JSON is an open format, standardized as STD 90 (RFC 8259), ECMA-404, and ISO/IEC 21778:2017.
clob: Text data of user-defined encoding; sexp: Ordered collections of values with application-defined semantics; Each Ion type supports a null variant, indicating a lack of value while maintaining a strict type (e.g., null.int, null.struct). The Ion format permits annotations to any value in the form of symbols.
In addition, it is suggested that each JSON text sequence be followed by a line feed character to allow proper handling of top-level JSON objects that are not self delimiting (numbers, true, false, and null). This format is also known as JSON Text Sequences or MIME type application/json-seq, and is formally described in IETF RFC 7464.
Users can download the raw PAE data for all residue pairs in a custom JSON format for further analysis or visualization using a programming language such as Python. The format of the JSON file is as follows:
JSON (JavaScript Object Notation, pronounced / ˈ dʒ eɪ s ən / or / ˈ dʒ eɪ ˌ s ɒ n /) is an open standard file format and data interchange format that uses human-readable text to store and transmit data objects consisting of name–value pairs and arrays (or other serializable values).
Smile is a computer data interchange format based on JSON.It can also be considered a binary serialization of the generic JSON data model, which means tools that operate on JSON may be used with Smile as well, as long as a proper encoder/decoder exists for the tool.
FlatBuffers is a free software library implementing a serialization format similar to Protocol Buffers, Thrift, Apache Avro, SBE, and Cap'n Proto, primarily written by Wouter van Oortmerssen and open-sourced by Google. It supports “zero-copy” deserialization, so that accessing the serialized data does not require first copying it into a ...