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  2. Primer extension - Wikipedia

    en.wikipedia.org/wiki/Primer_extension

    Primer extension offers an alternative to a nuclease protection assay (S1 nuclease mapping) for quantifying and mapping RNA transcripts. The hybridization probe for primer extension is a synthesized oligonucleotide, whereas S1 mapping requires isolation of a DNA fragment. Both methods provide information where a mRNA starts and provide an ...

  3. List of sequence alignment software - Wikipedia

    en.wikipedia.org/wiki/List_of_sequence_alignment...

    Free, GPL2 ALLALIGN For DNA, RNA and protein molecules up to 32MB, aligns all sequences of size K or greater, MSA or within a single molecule. Similar alignments are grouped together for analysis. Automatic repetitive sequence filter. Both Local E. Wachtel 2017 Free AMAP: Sequence annealing: Both: Global: A. Schwartz and L. Pachter: 2006: BAli-Phy

  4. List of open-source bioinformatics software - Wikipedia

    en.wikipedia.org/wiki/List_of_open-source...

    Windows: GPLv2: Agile Molecule AutoDock: Suite of automated docking tools Linux, Mac OS X, SGI IRIX, and Windows: GPL: Scripps Research: Avogadro: C++ based molecule editor and visualizer for in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. Linux, macOS, Unix, Windows: 3-Clause BSD License

  5. DNADynamo - Wikipedia

    en.wikipedia.org/wiki/DNADynamo

    DNADynamo is a general purpose DNA and Protein sequence analysis package that can carry out most of the functions required by a standard research molecular biology laboratory DNA and Protein Sequence viewing, editing and annotating; Contig assembly and chromatogram editing including comparison to a reference sequence to identify mutations

  6. List of alignment visualization software - Wikipedia

    en.wikipedia.org/wiki/List_of_alignment...

    Align DNA, RNA, protein, or DNA + protein sequences via a variety of pairwise and multiple sequence alignment algorithms, generate phylogenetic trees to predict evolutionary relationships, explore sequence tracks to view GC content, gap fraction, sequence logos, translation

  7. List of PDF software - Wikipedia

    en.wikipedia.org/wiki/List_of_PDF_software

    Google Chrome: Includes a PDF viewer. GSview: Open source software and Ghostscript's viewer for Windows. Microsoft Edge: Includes a PDF viewer. Microsoft Reader: A discontinued PDF viewer in Windows 8.1. Mozilla Firefox: Includes a PDF viewer. MuPDF: Free lightweight document viewer. Nitro PDF Reader: Freeware (though proprietary) PDF reader ...

  8. Download, install, or uninstall AOL Desktop Gold - AOL Help

    help.aol.com/articles/aol-desktop-downloading...

    Learn how to download and install or uninstall the Desktop Gold software and if your computer meets the system requirements.

  9. Clone manager - Wikipedia

    en.wikipedia.org/wiki/Clone_manager

    Clone Manager is a commercial bioinformatics software work suite of Sci-Ed, that supports molecular biologists with data management and allows them to perform certain in silico preanalysis.