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Allele frequency. Allele frequency, or gene frequency, is the relative frequency of an allele (variant of a gene) at a particular locus in a population, expressed as a fraction or percentage. [1] Specifically, it is the fraction of all chromosomes in the population that carry that allele over the total population or sample size.
Cline (biology) In biology, a cline is a measurable gradient in a single characteristic (or biological trait) of a species across its geographical range. [1] Clines usually have a genetic (e.g. allele frequency, blood type), or phenotypic (e.g. body size, skin pigmentation) character. They can show either smooth, continuous gradation in a ...
Genetic distance. Genetic distance is a measure of the genetic divergence between species or between populations within a species, whether the distance measures time from common ancestor or degree of differentiation. [ 2 ] Populations with many similar alleles have small genetic distances.
Genotype frequency in a population is the number of individuals with a given genotype divided by the total number of individuals in the population. [2] In population genetics, the genotype frequency is the frequency or proportion (i.e., 0 < f < 1) of genotypes in a population. Although allele and genotype frequencies are related, it is ...
Allee effects are classified by the nature of density dependence at low densities. If the population shrinks for low densities, there is a strong Allee effect. If the proliferation rate is positive and increasing then there is a weak Allee effect. The null hypothesis is that proliferation rates are positive but decreasing at low densities.
1. Introduce the reference of a SNP of interest, as an example: rs429358, in a database (dbSNP or other). 2. Find MAF/MinorAlleleCount link. MAF/MinorAlleleCount: C=0.1506/754 (1000 Genomes, where number of genomes sampled = N = 2504); [4] where C is the minor allele for that particular locus; 0.1506 is the frequency of the C allele (MAF), i.e. 15% within the 1000 Genomes database; and 754 is ...
Microevolution is the change in allele frequencies that occurs over time within a population. [1] This change is due to four different processes: mutation, selection (natural and artificial), gene flow and genetic drift. This change happens over a relatively short (in evolutionary terms) amount of time compared to the changes termed macroevolution.
Isolation by distance (IBD) is a term used to refer to the accrual of local genetic variation under geographically limited dispersal. [1] The IBD model is useful for determining the distribution of gene frequencies over a geographic region. [2] Both dispersal variance and migration probabilities are variables in this model and both contribute ...