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Eclipse Deeplearning4j is a programming library written in Java for the Java virtual machine (JVM). [ 2 ] [ 3 ] It is a framework with wide support for deep learning algorithms. [ 4 ] Deeplearning4j includes implementations of the restricted Boltzmann machine , deep belief net , deep autoencoder, stacked denoising autoencoder and recursive ...
Keras is an open-source library that provides a Python interface for artificial neural networks. Keras was first independent software, then integrated into the TensorFlow library , and later supporting more.
Free AMAP: Sequence annealing: Both: Global: A. Schwartz and L. Pachter: 2006: BAli-Phy: Tree+multi-alignment; probabilistic-Bayesian; joint estimation: Both + Codons: Global: BD Redelings and MA Suchard: 2005 (latest version 2018) Free, GPL: Base-By-Base Java-based multiple sequence alignment editor with integrated analysis tools: Both: Local ...
The third is necessary because algorithms for both multiple sequence alignment and structural alignment use heuristics which do not always perform perfectly. The fourth is a great example of how interactive graphical tools enable a worker involved in sequence analysis to conveniently execute a variety if different computational tools to explore ...
wapRNA This is a free web-based application for the processing of high-throughput RNA-Seq data (wapRNA) from next generation sequencing (NGS) platforms, such as Genome Analyzer of Illumina Inc. (Solexa) and SOLiD of Applied Biosystems (SOLiD). wapRNA provides an integrated tool for RNA sequence, refers to the use of High-throughput sequencing ...
Shannon's diagram of a general communications system, showing the process by which a message sent becomes the message received (possibly corrupted by noise). seq2seq is an approach to machine translation (or more generally, sequence transduction) with roots in information theory, where communication is understood as an encode-transmit-decode process, and machine translation can be studied as a ...
Wolfram Mathematica is a software system with built-in libraries for several areas of technical computing that allows machine learning, statistics, symbolic computation, data manipulation, network analysis, time series analysis, NLP, optimization, plotting functions and various types of data, implementation of algorithms, creation of user interfaces, and interfacing with programs written in ...
Eclipse Theia is an Eclipse open source project providing the Theia Platform and the Theia IDE. The Eclipse Theia Platform is a free and open-source framework for building IDEs and tools based on web technologies. [3] Theia-based applications can be deployed as desktop and web applications. [4] It is implemented in TypeScript and emphasizes ...