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  2. CellProfiler - Wikipedia

    en.wikipedia.org/wiki/CellProfiler

    A wide variety of measurements can be generated for each identified cell or subcellular compartment, including morphology, intensity, and texture among others. These measurements are accessible by using built-in viewing and plotting data tools, exporting in a comma-delimited spreadsheet format, [ 9 ] or importing into a MySQL or SQLite database.

  3. Cytometry - Wikipedia

    en.wikipedia.org/wiki/Cytometry

    Cytometers are the instruments which count the blood cells in the common blood test.. Cytometry is the measurement of number and characteristics of cells.Variables that can be measured by cytometric methods include cell size, cell count, cell morphology (shape and structure), cell cycle phase, DNA content, and the existence or absence of specific proteins on the cell surface or in the ...

  4. List of microscopy visualization systems - Wikipedia

    en.wikipedia.org/wiki/List_of_microscopy...

    This is a list of software systems that are used for visualizing microscopy data. For each software system, the table below indicates which type of data can be displayed: EM = Electron microscopy; MG = Molecular graphics; Optical = Optical microscopy.

  5. Cell counting - Wikipedia

    en.wikipedia.org/wiki/Cell_counting

    The cell culture is placed in a transparent cuvette and the absorption is measured relative to medium alone. Optical density (OD) is directly proportional to the biomass in the cell suspension in a given range that is specific to the cell type. Using spectrophotometry for measuring the turbidity of cultures is known as turbidometry.

  6. UTOPIA (bioinformatics tools) - Wikipedia

    en.wikipedia.org/wiki/UTOPIA_(bioinformatics_tools)

    UTOPIA (User-friendly Tools for Operating Informatics Applications) is a suite of free tools for visualising and analysing bioinformatics data. Based on an ontology-driven data model, it contains applications for viewing and aligning protein sequences, rendering complex molecular structures in 3D, and for finding and using resources such as web services and data objects.

  7. Virtual Cell - Wikipedia

    en.wikipedia.org/wiki/Virtual_Cell

    The results can be displayed on-line, or they can be downloaded to the user's computer in a wide variety of export formats. The Virtual Cell license allows free access to all members of the scientific community. [6] Users may save their models in the VCell DataBase, which is maintained on servers at U. Connecticut.

  8. Hemocytometer - Wikipedia

    en.wikipedia.org/wiki/Hemocytometer

    Phytoplankton cell counting; Cell processing for downstream analysis: accurate cell numbers are needed in many tests (PCR, flow cytometry), while some others require high cell viability. Measurement of cell size: in a micrograph, the real cell size can be inferred by scaling it to the width of a hemocytometer square, which is known. [7]

  9. Microscopic scale - Wikipedia

    en.wikipedia.org/wiki/Microscopic_scale

    In thermodynamics and statistical mechanics, the microscopic scale is the scale at which we do not measure or directly observe the precise state of a thermodynamic system – such detailed states of a system are called microstates. We instead measure thermodynamic variables at a macroscopic scale, i.e. the macrostate. [citation needed]

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