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Gephi is widely used within the digital humanities (in history, [21] literature, political sciences, etc.), a community where many of its developers are involved. Gephi inspired the LinkedIn InMaps [ 22 ] and was used for the network visualizations for Truthy.
GitHub: GitHub, Inc. (A subsidiary of Microsoft Corporation) 2008-04 No Yes Unknown Denies service to Crimea, North Korea, Sudan, Syria [9] List of government takedown requests. GitLab: GitLab Inc. 2011-09 [10] Partial [11] Yes [12] GitLab FOSS – free software GitLab Enterprise Edition (EE) – proprietary
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Preprint repository of scholarly work in the fields of biomedical sciences, chemistry, and earth sciences >1,000 2007–2012 Nature Publishing Group: NutriXiv: Nutritional sciences: Preprint service for the nutritional sciences <100 2018 Center for Open Science: Optimization Online: Mathematics: Eprint repository for optimization topics >10,000 ...
The software is open source, source code can be downloaded from the project's GitHub page. [5] There are several open source software packages that use igraph functions. As an example, R packages tnet, [6] igraphtosonia [7] and cccd [8] depend on igraph R package.
Heurist is an Open Source online database builder and CMS publisher designed for Humanities research data and collections, including data on people, organisations, places, events, artefacts, documents, media, bibliographic records, [1] contemporary stories and other data which is rich in text and classification data, richly interlinked, and often heterogeneous.
Gephi has a Graphviz plugin. Gramps uses Graphviz to create genealogical (family tree) diagrams. Graph-tool a Python library for graph manipulation and visualization. OmniGraffle version 5 and later uses the Graphviz engine, with a limited set of commands, for automatically laying out graphs. [9] Org-mode can work with DOT source code blocks. [10]