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  2. pandas (software) - Wikipedia

    en.wikipedia.org/wiki/Pandas_(software)

    [4]: 114 A DataFrame is a 2-dimensional data structure of rows and columns, similar to a spreadsheet, and analogous to a Python dictionary mapping column names (keys) to Series (values), with each Series sharing an index. [4]: 115 DataFrames can be concatenated together or "merged" on columns or indices in a manner similar to joins in SQL.

  3. Inverted index - Wikipedia

    en.wikipedia.org/wiki/Inverted_index

    In computer science, an inverted index (also referred to as a postings list, postings file, or inverted file) is a database index storing a mapping from content, such as words or numbers, to its locations in a table, or in a document or a set of documents (named in contrast to a forward index, which maps from documents to content). [1]

  4. Pearson correlation coefficient - Wikipedia

    en.wikipedia.org/wiki/Pearson_correlation...

    The Pandas and Polars Python libraries implement the Pearson correlation coefficient calculation as the default option for the methods pandas.DataFrame.corr and polars.corr, respectively. Wolfram Mathematica via the Correlation function, or (with the P value) with CorrelationTest. The Boost C++ library via the correlation_coefficient function.

  5. Spearman's rank correlation coefficient - Wikipedia

    en.wikipedia.org/wiki/Spearman's_rank_correlation...

    Python has many different implementations of the spearman correlation statistic: it can be computed with the spearmanr function of the scipy.stats module, as well as with the DataFrame.corr(method='spearman') method from the pandas library, and the corr(x, y, method='spearman') function from the statistical package pingouin.

  6. Data orientation - Wikipedia

    en.wikipedia.org/wiki/Data_orientation

    The two most common representations are column-oriented (columnar format) and row-oriented (row format). [ 1 ] [ 2 ] The choice of data orientation is a trade-off and an architectural decision in databases , query engines, and numerical simulations. [ 1 ]

  7. BED (file format) - Wikipedia

    en.wikipedia.org/wiki/BED_(file_format)

    A BED file consists of a minimum of three columns to which nine optional columns can be added for a total of twelve columns. The first three columns contain the names of chromosomes or scaffolds, the start, and the end coordinates of the sequences considered. The next nine columns contain annotations related to these sequences.

  8. Kernel density estimation - Wikipedia

    en.wikipedia.org/wiki/Kernel_density_estimation

    Kernel density estimation of 100 normally distributed random numbers using different smoothing bandwidths.. In statistics, kernel density estimation (KDE) is the application of kernel smoothing for probability density estimation, i.e., a non-parametric method to estimate the probability density function of a random variable based on kernels as weights.

  9. Softmax function - Wikipedia

    en.wikipedia.org/wiki/Softmax_function

    In statistical mechanics, the softargmax function is known as the Boltzmann distribution (or Gibbs distribution): [5]: 7 the index set , …, are the microstates of the system; the inputs are the energies of that state; the denominator is known as the partition function, often denoted by Z; and the factor β is called the coldness (or ...