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In machine learning and data mining, quantification (variously called learning to quantify, or supervised prevalence estimation, or class prior estimation) is the task of using supervised learning in order to train models (quantifiers) that estimate the relative frequencies (also known as prevalence values) of the classes of interest in a sample of unlabelled data items.
The Computer Language Benchmarks Game site warns against over-generalizing from benchmark data, but contains a large number of micro-benchmarks of reader-contributed code snippets, with an interface that generates various charts and tables comparing specific programming languages and types of tests.
These metrics are therefore computed statically from the code. Halstead's goal was to identify measurable properties of software, and the relations between them. This is similar to the identification of measurable properties of matter (like the volume, mass, and pressure of a gas) and the relationships between them (analogous to the gas equation ).
Chidamber and Kemerer [4] proposed a set of programing complexity metrics widely used in measurements and academic articles: weighted methods per class, coupling between object classes, response for a class, number of children, depth of inheritance tree, and lack of cohesion of methods, described below:
Pandas – High-performance computing (HPC) data structures and data analysis tools for Python in Python and Cython (statsmodels, scikit-learn) Perl Data Language – Scientific computing with Perl; Ploticus – software for generating a variety of graphs from raw data; PSPP – A free software alternative to IBM SPSS Statistics
The purpose of bounded quantification is to allow for polymorphic functions to depend on some specific behaviour of objects instead of type inheritance.It assumes a record-based model for object classes, where every class member is a record element and all class members are named functions.
pyOpenMS is an open-source Python library for mass spectrometry, specifically for the analysis of proteomics and metabolomics data in Python. Peaksel Proprietary: This web-based (available both in cloud as SaaS and as on-prem installation) software for LC/MS data processing supports batch processing and high-throughput experiments.
fastqp Simple FASTQ quality assessment using Python. Kraken: [9] A set of tools for quality control and analysis of high-throughput sequence data. HTSeq [10] The Python script htseq-qa takes a file with sequencing reads (either raw or aligned reads) and produces a PDF file with useful plots to assess the technical quality of a run.