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The Codon Adaptation Index (CAI) [1] is the most widespread technique for analyzing codon usage bias.As opposed to other measures of codon usage bias, such as the 'effective number of codons' (Nc), which measure deviation from a uniform bias (null hypothesis), CAI measures the deviation of a given protein coding gene sequence with respect to a reference set of genes.
Overmatching thus causes statistical bias. [13] For example, matching the control group by gestation length and/or the number of multiple births when estimating perinatal mortality and birthweight after in vitro fertilization (IVF) is overmatching, since IVF itself increases the risk of premature birth and multiple birth. [14]
Selection bias is the bias introduced by the selection of individuals, groups, or data for analysis in such a way that proper randomization is not achieved, thereby failing to ensure that the sample obtained is representative of the population intended to be analyzed. [1] It is sometimes referred to as the selection effect.
The out-group homogeneity effect is the perception of out-group members as more similar to one another than are in-group members, e.g. "they are alike; we are diverse". [1] Perceivers tend to have impressions about the diversity or variability of group members around those central tendencies or typical attributes of those group members.
A simple cladogram showing the evolutionary relationships between four species: A, B, C, and D. Here, Species A is the outgroup, and Species B, C, and D form the ingroup. In cladistics or phylogenetics, an outgroup [1] is a more distantly related group of organisms that serves as a reference group when determining the evolutionary relationships of the ingroup, the set of organisms under study ...
The bias is related to intergroup attribution bias. The attribution bias can be explained by group schemas. The grouping schema assumes that one will like and trust members of their in-group and dislike and hate are expected reactions to the out-group. [3]
The first one describes a bias and an asymmetric mutational pressure on each DNA strand during replication and transcription. [4] [11] Due to the asymmetric nature of the replication process, an unequal mutational frequency and DNA repair efficiency during the replication process can introduce more mutations in one strand as compared to the ...
A test of homogeneity compares the distribution of counts for two or more groups using the same categorical variable (e.g. choice of activity—college, military, employment, travel—of graduates of a high school reported a year after graduation, sorted by graduation year, to see if number of graduates choosing a given activity has changed ...