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InterPro is a database of protein families, protein domains and functional sites in which identifiable features found in known proteins can be applied to new protein sequences [2] in order to functionally characterise them.
An automated procedure for generating articles based on InterPro and Pfam data has also been implemented, which populates a page with information and links to databases as well as available images, then once an article has been reviewed by a curator it is moved from the Sandbox to Wikipedia proper.
In molecular biology the BED-type zinc finger domain is a protein domain which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi.
InterPro The signal recognition particle ( SRP ) is an abundant, cytosolic, universally conserved ribonucleoprotein ( protein - RNA complex) that recognizes and targets specific proteins to the endoplasmic reticulum in eukaryotes and the plasma membrane in prokaryotes .
The transmembrane cation channel superfamily was defined in InterPro and Pfam as the family of tetrameric ion channels.These include the sodium, potassium, [1] calcium, ryanodine receptor, HCN, CNG, CatSper, and TRP channels.
The linked InterPro entry represents mono-haem cytochrome c proteins (excluding class II and f-type cytochromes), such as cytochromes c, c1, c2, c5, c555, c550-c553, c556, c6 and cbb3. Diheme cytochrome c (InterPro: IPR018588) are proteins with a class I cluster and a unique cluster.
The class C G-protein-coupled receptors (InterPro: IPR000337) are a class of G-protein coupled receptors that include the metabotropic glutamate receptors (InterPro: IPR000162) and several additional receptors.
Acute-phase serum amyloid A proteins (A-SAAs) are secreted during the acute phase of inflammation.These proteins have several roles, including the transport of cholesterol to the liver for secretion into the bile, the recruitment of immune cells to inflammatory sites, and the induction of enzymes that degrade extracellular matrix.