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Lysine biosynthesis pathways. Two pathways are responsible for the de novo biosynthesis of L -lysine, namely the (A) diaminopimelate pathway and (B) α‑aminoadipate pathway. Two pathways have been identified in nature for the synthesis of lysine.
Amino acid biosynthesis is the set of biochemical processes (metabolic pathways) by which the amino acids are produced. The substrates for these processes are various compounds in the organism 's diet or growth media. Not all organisms are able to synthesize all amino acids. For example, humans can synthesize 11 of the 20 standard amino acids.
The diaminopimelic acid pathway. There are two distinct lysine biosynthetic pathways: the diaminopimelic acid pathway and the α-aminoadipate pathway. The most common of the two synthetic pathways is the diaminopimelic acid pathway; it consists of several enzymatic reactions that add carbon groups to aspartate to yield lysine: [30]
This pathway is a part of the glutamate family of amino acid biosynthetic pathways. [2] The reaction steps in the pathway are similar to the citric acid cycle. The first step in the pathway is condensation of acetyl-CoA with α-ketoglutarate, which gives homocitrate. This reaction is catalyzed by homocitrate synthase.
The polypeptide chain then folds and is post-translationally modified. Protein biosynthesis (or protein synthesis) is a core biological process, occurring inside cells, balancing the loss of cellular proteins (via degradation or export) through the production of new proteins. Proteins perform a number of critical functions as enzymes ...
α-Aminoadipic acid is one of the metabolic precursor in the biosynthesis of lysine through α-aminoadipate pathway. Its conjugate base is α-aminoadipate, which is the prevalent form at physiological pH. α-Aminoadipic acid has a stereogenic center and can appear in two enantiomers, L -α-aminoadipate and D -α-aminoadipate.
The intermediate aspartate semialdehyde is the branching point with the lysine biosynthetic pathway, where it is instead condensed with pyruvate. Homoserine is the branching point with the threonine pathway, where instead it is isomerised after activating the terminal hydroxyl with phosphate (also used for methionine biosynthesis in plants). [9]
Alpha-aminoadipic semialdehyde synthase. Alpha-aminoadipic semialdehyde synthase is an enzyme encoded by the AASS gene in humans and is involved in their major lysine degradation pathway. It is similar to the separate enzymes coded for by the LYS1 and LYS9 genes in yeast, and related to, although not similar in structure, the bifunctional ...
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