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Evolution of fish to tetrapods. The basic body plan has been phylogenetically constrained. Most terrestrial vertebrates have a body plan that consist of four limbs. The phylogenetic inertia hypothesis suggests that this body plan is observed, not because it happens to be optimal, but because tetrapods are derived from a clade of fishes (Sarcopterygii) which also have four limbs.
The phyllosoma larva of spiny lobsters has a long planktonic life before metamorphosing into the puerulus stage, which is the transitional stage from planktonic to a benthic existence. [ 3 ] [ 4 ] Despite the importance of larval survival to predict recruitment, not much is known about the biology of phyllosoma larvae. [ 5 ]
Biological constraints are factors which make populations resistant to evolutionary change. One proposed definition of constraint is "A property of a trait that, although possibly adaptive in the environment in which it originally evolved, acts to place limits on the production of new phenotypic variants."
The idea of a tree of life arose from ancient notions of a ladder-like progression from lower into higher forms of life (such as in the Great Chain of Being).Early representations of "branching" phylogenetic trees include a "paleontological chart" showing the geological relationships among plants and animals in the book Elementary Geology, by Edward Hitchcock (first edition: 1840).
Phylogenetic comparative methods (PCMs) use information on the historical relationships of lineages (phylogenies) to test evolutionary hypotheses. The comparative method has a long history in evolutionary biology; indeed, Charles Darwin used differences and similarities between species as a major source of evidence in The Origin of Species .
In phylogenetics, an apomorphy (or derived trait) is a novel character or character state that has evolved from its ancestral form (or plesiomorphy). [ 2 ] [ 3 ] [ 4 ] A synapomorphy is an apomorphy shared by two or more taxa and is therefore hypothesized to have evolved in their most recent common ancestor .
The principle of phylogenetic reconciliation was introduced in 1979 [14] to account for differences between genes and species-level phylogenies. In a parsimonious setting, two evolutionary events, gene duplication and gene loss were invoked to explain the discrepancies between a gene tree and a species tree.
Phylogenetic bracketing is a method of inference used in biological sciences. It is used to infer the likelihood of unknown traits in organisms based on their position in a phylogenetic tree. One of the main applications of phylogenetic bracketing is on extinct organisms, known only from fossils, going back to the last universal common ancestor ...