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  2. Variant Call Format - Wikipedia

    en.wikipedia.org/wiki/Variant_Call_Format

    A flag indicating which of a given set of filters the variation has failed or PASS if all the filters were passed successfully. 8: INFO An extensible list of key-value pairs (fields) describing the variation. See below for some common fields. Multiple fields are separated by semicolons with optional values in the format: <key>=<data>[,data]. 9 ...

  3. European Nucleotide Archive - Wikipedia

    en.wikipedia.org/wiki/European_Nucleotide_Archive

    EMBL-Bank format uses a different syntax to the records in DDBJ and GenBank, though each format uses certain standardised nomenclature, such as taxonomies as defined by the NCBI Taxon database. Each line of an EMBL-format file begins with a two-letter code, such as AC to label the accession number and KW for a list of keywords relevant to the ...

  4. List of datasets for machine-learning research - Wikipedia

    en.wikipedia.org/wiki/List_of_datasets_for...

    Samples hand-labeled as positive or negative. 2000 Text Classification 2014 [53] [54] N. Abdulla Buzz in Social Media Dataset Data from Twitter and Tom's Hardware. This dataset focuses on specific buzz topics being discussed on those sites. Data is windowed so that the user can attempt to predict the events leading up to social media buzz ...

  5. Biological data - Wikipedia

    en.wikipedia.org/wiki/Biological_data

    Biological data works closely with bioinformatics, which is a recent discipline focusing on addressing the need to analyze and interpret vast amounts of genomic data.. In the past few decades, leaps in genomic research have led to massive amounts of biological data.

  6. List of biological databases - Wikipedia

    en.wikipedia.org/wiki/List_of_biological_databases

    Ensembl Genomes: provides genome-scale data for bacteria, protists, fungi, plants and invertebrate metazoa, through a unified set of interactive and programmatic interfaces (using the Ensembl software platform) FlyBase: genome of the model organism Drosophila melanogaster; Gene Disease Database

  7. Binary Alignment Map - Wikipedia

    en.wikipedia.org/wiki/Binary_Alignment_Map

    Binary Alignment Map (BAM) is the comprehensive raw data of genome sequencing; [1] it consists of the lossless, compressed binary representation of the Sequence Alignment Map-files. [2] [3] BAM is the compressed binary representation of SAM (Sequence Alignment Map), a compact and index-able representation of nucleotide sequence alignments. [4]

  8. Nexus file - Wikipedia

    en.wikipedia.org/wiki/Nexus_file

    The extensible NEXUS file format is widely used in bioinformatics.It stores information about taxa, morphological and molecular characters, distances, genetic codes, assumptions, sets, trees, etc. [1] Several popular phylogenetic programs such as PAUP*, [2] MrBayes, [3] Mesquite, [4] MacClade [5] and SplitsTree [6] use this format.

  9. General Data Format for Biomedical Signals - Wikipedia

    en.wikipedia.org/wiki/General_Data_Format_for...

    The GDF format is often used in brain–computer interface research. [4] [5] [6] However, since GDF provides a superset of features from many different file formats, it could be also used for many other domains. The free and open source software BioSig library provides implementations for reading and writing of GDF in GNU Octave/MATLAB and C ...