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The tubules consist of repeating units of the proteins TssA and TssB (VipA/VipB) arranged as a sheath around a tube built from stacked hexameric rings of the haemolysin co-regulated protein (Hcp). [ 12 ] [ 13 ] At the tip of the Hcp tube sits a trimer of the phage tail spike-like protein VgrG, which is in turn capped by a pointed PAAR domain ...
The virus particles have a distinct shape; each virion has an icosahedral head that contains the viral genome, and is attached to a flexible tail by a connector protein. [2] The order encompasses a wide range of viruses, many containing genes of similar nucleotide sequence and function.
Structural model at atomic resolution of bacteriophage T4 [1] The structure of a typical myovirus bacteriophage Anatomy and infection cycle of bacteriophage T4.. A bacteriophage (/ b æ k ˈ t ɪər i oʊ f eɪ dʒ /), also known informally as a phage (/ ˈ f eɪ dʒ /), is a virus that infects and replicates within bacteria and archaea.
Genome of the bacteriophage ΦX174 showing its 11 genes [10] This bacteriophage has a [+] sense circular single-stranded DNA genome of 5,386 nucleotides. [10] The genome GC-content is 44% and 95% of nucleotides belong to coding genes. Because of the balance base pattern of the genome, it is used as the control DNA for Illumina sequencers.
Peptidoglycan is made up of a polysaccharide backbone consisting of alternating N-Acetylmuramic acid (NAM) and N-acetylglucosamine (NAG) residues in equal amounts. Peptidoglycan is responsible for the rigidity of the bacterial cell wall, and for the determination of cell shape. It is relatively porous and is not considered to be a permeability ...
Multiple shapes of virions. Since the genome of viruses is relatively simple, the capsid architecture relies on repetition of simple structures, similar to the faces of a polyhedron. Each face in turn is formed by a repetition of simpler sub-units, with the amount of repetitions called a triangulation number (T). Similar capsid structures can ...
Genetic studies on M13 using conditional lethal mutants, initiated by David Pratt and colleagues, led to description of phage gene functions. [ 32 ] [ 33 ] Notably, the protein product of gene 5, which is required for synthesis of progeny single-stranded DNA, is made in large amounts in the infected bacteria, [ 34 ] [ 35 ] [ 36 ] and it binds ...
Phage display cycle. 1) fusion proteins for a viral coat protein + the gene to be evolved (typically an antibody fragment) are expressed in bacteriophage. 2) the library of phage are washed over an immobilised target. 3) the remaining high-affinity binders are used to infect bacteria. 4) the genes encoding the high-affinity binders are isolated.