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  2. Primer (molecular biology) - Wikipedia

    en.wikipedia.org/wiki/Primer_(molecular_biology)

    The free NCBI tool Primer-BLAST integrates primer design and BLAST search into one application, [6] as do commercial software products such as ePrime and Beacon Designer. Computer simulations of theoretical PCR results ( Electronic PCR ) may be performed to assist in primer design by giving melting and annealing temperatures, etc. [ 7 ]

  3. In silico PCR - Wikipedia

    en.wikipedia.org/wiki/In_silico_PCR

    The design of appropriate short or long primer pairs is only one goal of PCR product prediction. Other information provided by in silico PCR tools may include determining primer location, orientation, length of each amplicon, simulation of electrophoretic mobility, identification of open reading frames, and links to other web resources. [7] [8] [9]

  4. Beacon designer - Wikipedia

    en.wikipedia.org/wiki/Beacon_Designer

    Beacon Designer designs primers and probes for real-time PCR (polymerase chain reaction) assays.It is compatible to work on Windows as well as on Mac. The software currently supports the following real-time PCR chemistries for primer and probe design:

  5. Polymerase chain reaction - Wikipedia

    en.wikipedia.org/wiki/Polymerase_chain_reaction

    A strip of eight PCR tubes, each containing a 100 μL reaction mixture Placing a strip of eight PCR tubes into a thermal cycler. The polymerase chain reaction (PCR) is a method widely used to make millions to billions of copies of a specific DNA sample rapidly, allowing scientists to amplify a very small sample of DNA (or a part of it) sufficiently to enable detailed study.

  6. OLIGO Primer Analysis Software - Wikipedia

    en.wikipedia.org/wiki/OLIGO_Primer_Analysis_Software

    OLIGO Primer Analysis Software is a software for DNA primer design. [ 1 ] [ 2 ] The first paper describing this software was published in 1989. [ 3 ] The program is a real time PCR primer and probe search and analysis tool.

  7. Polymerase chain reaction optimization - Wikipedia

    en.wikipedia.org/wiki/Polymerase_chain_reaction...

    Computer simulations of theoretical PCR results (Electronic PCR) may be performed to assist in primer design. [14] Touchdown polymerase chain reaction or touchdown style polymerase chain reaction is a method of polymerase chain reaction by which primers will avoid amplifying nonspecific sequences.

  8. Overlap extension polymerase chain reaction - Wikipedia

    en.wikipedia.org/wiki/Overlap_extension...

    The overall success of OE-PCR based DNA assemblies relies on several factors, being the most relevant ones the instrinsic features of the DNA sequence to assemble, the sequence and length of the overlapping overhangs, the design of outer primers for the final amplification and the conditions of the PCR reaction.

  9. TaqMan - Wikipedia

    en.wikipedia.org/wiki/TaqMan

    TaqMan RT-PCR resources- primer databases, software, protocols Archived 2010-11-25 at the Wayback Machine 2. Beacon Designer - Software to design real time PCR primers and probes including SYBR Green primers, TaqMan Probes, Molecular Beacons.

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