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One of Pauling's examples is olivine, M 2 SiO 4, where M is a mixture of Mg 2+ at some sites and Fe 2+ at others. The structure contains distinct SiO 4 tetrahedra which do not share any oxygens (at corners, edges or faces) with each other. The lower-valence Mg 2+ and Fe 2+ cations are surrounded by polyhedra which do share oxygens.
Structural chemistry is a part of chemistry and deals with spatial structures of molecules (in the gaseous, liquid or solid state) and solids (with extended structures that cannot be subdivided into molecules). For structure elucidation [1] a range of different methods is used.
Wavy single bonds represent unknown or unspecified stereochemistry or a mixture of isomers. For example, the adjacent diagram shows the fructose molecule with a wavy bond to the HOCH 2 - group at the left. In this case the two possible ring structures are in chemical equilibrium with each other and also with the open-chain structure.
The rightmost structure in the diagram has a charge of -2 on the nitrogen atom. Applying the principle of electroneutrality this can be identified as only a minor contributor. Additionally as the most electronegative atom should carry the negative charge, then the triple bonded structure on the left is predicted to be the major contributor. [7]
Enantiotopic groups are identical and indistinguishable except in chiral environments. For instance, the CH 2 hydrogens in ethanol (CH 3 CH 2 OH) are normally enantiotopic, but can be made different (diastereotopic) if combined with a chiral center, for instance by conversion to an ester of a chiral carboxylic acid such as lactic acid, or if coordinated to a chiral metal center, or if ...
Physical chemistry, in contrast to chemical physics, is predominantly (but not always) a supra-molecular science, as the majority of the principles on which it was founded relate to the bulk rather than the molecular or atomic structure alone (for example, chemical equilibrium and colloids).
A molecule that contains double or triple bonds separated by one single bond; e.g. the compound buta-1,3-diene, with the chemical structure H 2 C=CH−CH=CH 2, has conjugated double bonds. In such molecules, there is some delocalization of electrons in the pi orbitals between the carbon atoms linked by the single bond. [3]
In many common bonds of this type, the bonding orbital is shifted towards two of the three atoms instead of being spread equally among all three. Example molecules with 3c–2e bonds are the trihydrogen cation (H + 3) and diborane (B 2 H 6). In these two structures, the three atoms in each 3c-2e bond form an angular geometry, leading to a bent ...