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ArviZ also provides a common data structure for manipulating and storing data commonly arising in Bayesian analysis, like posterior samples or observed data. ArviZ is an open source project, developed by the community and is an affiliated project of NumFOCUS .
PolyAnalyst is a data science software platform developed by Megaputer Intelligence that provides an environment for text mining, data mining, machine learning, and predictive analytics. It is used by Megaputer to build tools with applications to health care , business management , insurance , and other industries.
Pandas – High-performance computing (HPC) data structures and data analysis tools for Python in Python and Cython (statsmodels, scikit-learn) Perl Data Language – Scientific computing with Perl; Ploticus – software for generating a variety of graphs from raw data; PSPP – A free software alternative to IBM SPSS Statistics
CS-ROSETTA is distributed together with a toolbox written in Python that facilitates preparation of input files, setting up of large-scale calculations and post-processing of simulation output. CS-ROSETTA calculations require a substantial computational effort and are usually carried out with 200-2000 parallel processes on computer clusters ...
By default, a Pandas index is a series of integers ascending from 0, similar to the indices of Python arrays. However, indices can use any NumPy data type, including floating point, timestamps, or strings. [4]: 112 Pandas' syntax for mapping index values to relevant data is the same syntax Python uses to map dictionary keys to values.
Spyder is extensible with first-party and third-party plugins, [8] and includes support for interactive tools for data inspection and embeds Python-specific code quality assurance and introspection instruments, such as Pyflakes, Pylint [9] and Rope. [10] [11] Spyder uses Qt for its GUI and is designed to use either of the PyQt or PySide Python ...
APBS (previously also Advanced Poisson-Boltzmann Solver) is a free and open-source software for solving the equations of continuum electrostatics intended primarily for the large biomolecular systems. [1] [2] It is available under the BSD license. PDB2PQR prepares the protein structure files from Protein Data Bank for use with APBS.
Orange is an open-source software package released under GPL and hosted on GitHub.Versions up to 3.0 include core components in C++ with wrappers in Python.From version 3.0 onwards, Orange uses common Python open-source libraries for scientific computing, such as numpy, scipy and scikit-learn, while its graphical user interface operates within the cross-platform Qt framework.