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To avoid this ambiguity, Pandas supports the syntax data.loc['a'] as an alternative way to filter using the index. Pandas also supports the syntax data.iloc[n], which always takes an integer n and returns the nth value, counting from 0. This allows a user to act as though the index is an array-like sequence of integers, regardless of how it is ...
The set ret can be saved efficiently by just storing the index i, which is the last character of the longest common substring (of size z) instead of S[(i-z+1)..i]. Thus all the longest common substrings would be, for each i in ret, S[(ret[i]-z)..(ret[i])]. The following tricks can be used to reduce the memory usage of an implementation:
dplyr is an R package whose set of functions are designed to enable dataframe (a spreadsheet-like data structure) manipulation in an intuitive, user-friendly way. It is one of the core packages of the popular tidyverse set of packages in the R programming language. [1]
The output is a hash code used to index a hash table holding the data or records, or pointers to them. A hash function may be considered to perform three functions: Convert variable-length keys into fixed-length (usually machine-word -length or less) values, by folding them by words or other units using a parity-preserving operator like ADD or XOR,
Fisher's exact test (also Fisher-Irwin test) is a statistical significance test used in the analysis of contingency tables. [1] [2] [3] Although in practice it is employed when sample sizes are small, it is valid for all sample sizes.
Python data analysis toolkit pandas has the function pivot_table [16] and the xs method useful to obtain sections of pivot tables. [ citation needed ] R has the Tidyverse metapackage, which contains a collection of tools providing pivot table functionality, [ 17 ] [ 18 ] as well as the pivottabler package.
The Python programming language can access netCDF files with the PyNIO [14] module (which also facilitates access to a variety of other data formats). netCDF files can also be read with the Python module netCDF4-python, [15] and into a pandas-like DataFrame with the xarray module.
orfipy is a tool written in Python / Cython to extract ORFs in an extremely and fast and flexible manner. [22] orfipy can work with plain or gzipped FASTA and FASTQ sequences, and provides several options to fine-tune ORF searches; these include specifying the start and stop codons, reporting partial ORFs, and using custom translation tables ...