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  2. DNA glycosylase - Wikipedia

    en.wikipedia.org/wiki/DNA_glycosylase

    In addition to their role in base excision repair, DNA glycosylase enzymes have been implicated in the repression of gene silencing in A. thaliana, N. tabacum and other plants by active demethylation. 5-methylcytosine residues are excised and replaced with unmethylated cytosines allowing access to the chromatin structure of the enzymes and ...

  3. Jian-Kang Zhu - Wikipedia

    en.wikipedia.org/wiki/Jian-Kang_Zhu

    They also identified several regulatory factors for plant cold stress response. In addition, they discovered a number of plant miRNAs and siRNAs, and elucidated their function in regulating plant stress responses. [15] In epigenetics, Zhu's lab discovered the Arabidopsis 5-methylcytosine DNA glycosylase/lyase ROS1 in 2002.

  4. Base excision repair - Wikipedia

    en.wikipedia.org/wiki/Base_excision_repair

    Uracil DNA glycosylase flips a uracil residue out of the duplex, shown in yellow. DNA glycosylases are responsible for initial recognition of the lesion. They flip the damaged base out of the double helix, as pictured, and cleave the N-glycosidic bond of the damaged base, leaving an AP site. There are two categories of glycosylases ...

  5. Glycosylation - Wikipedia

    en.wikipedia.org/wiki/Glycosylation

    The process is non-templated (unlike DNA transcription or protein translation); instead, the cell relies on segregating enzymes into different cellular compartments (e.g., endoplasmic reticulum, cisternae in Golgi apparatus). Therefore, glycosylation is a site-specific modification.

  6. AP endonuclease - Wikipedia

    en.wikipedia.org/wiki/AP_endonuclease

    Apurinic/apyrimidinic (AP) endonuclease is an enzyme that is involved in the DNA base excision repair pathway (BER). Its main role in the repair of damaged or mismatched nucleotides in DNA is to create a nick in the phosphodiester backbone of the AP site created when DNA glycosylase removes the damaged base.

  7. RNA-directed DNA methylation - Wikipedia

    en.wikipedia.org/wiki/RNA-Directed_DNA_Methylation

    DNA methylation can be lost passively with each cell division, because newly synthesized strands of DNA lack DNA methylation until it is re-added by one of the maintenance DNA methylation pathways. [134] DNA methylation can also be actively removed in plants by DNA glycosylases, which remove methylated cytosines via the base excision repair ...

  8. Uracil-DNA glycosylase - Wikipedia

    en.wikipedia.org/wiki/Uracil-DNA_glycosylase

    Uracil-DNA glycosylase (also known as UNG or UDG) is an enzyme. Its most important function is to prevent mutagenesis by eliminating uracil from DNA molecules by cleaving the N-glycosidic bond and initiating the base-excision repair (BER) pathway.

  9. DNA-3-methyladenine glycosylase - Wikipedia

    en.wikipedia.org/.../DNA-3-methyladenine_glycosylase

    DNA repair mechanisms take on a vital role in maintaining the genomic integrity of cells from different organisms, in particular 3-Methyladenine DNA glycosylases are found in bacteria, yeast, plants, rodents, and humans. Therefore, there are different subfamilies of this enzyme, such as the Human Alkyladenine DNA Glycosylase (hAAG), that act on ...