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Four different subunits were found to be important for the function of the photosynthetic reaction center. The L and M subunits, shown in blue and purple in the image of the structure, both span the lipid bilayer of the plasma membrane. They are structurally similar to one another, both having 5 transmembrane alpha helices. [6]
A gene cluster is a group of two or more genes found within an organism's DNA that encode similar polypeptides or proteins which collectively share a generalized function and are often located within a few thousand base pairs of each other.
The main function of PSII is to efficiently split water into oxygen molecules and protons. PSII will provide a steady stream of electrons to PSI, which will boost these in energy and transfer them to NADP + and H + to make NADPH. The hydrogen from this NADPH can then be used in a number of different processes within the plant. [2]
However, PSII has an additional function over the bacterial system. At the oxidising side of PSII, a redox-active residue in the D1 protein reduces P680, the oxidised tyrosine then withdrawing electrons from a manganese cluster, which in turn withdraw electrons from water, leading to the splitting of water and the formation of molecular oxygen.
The active site of the OEC consists of a cluster of manganese and calcium with the formula Mn 4 Ca 1 O x Cl 1–2 (HCO 3) y. This cluster is bound to D 1 and CP 43 subunits and stabilized by peripheral membrane proteins. Many characteristics of it have been examined by flash photolysis experiments, electron paramagnetic resonance (EPR), and X ...
5 cluster (including two chloride ions), one non heme Fe 2+ and two putative Ca 2+ ions per monomer. [4] There are several crystal structures of photosystem II. [5] The PDB accession codes for this protein are 3WU2, 3BZ1, 3BZ2 (3BZ1 and 3BZ2 are monomeric structures of the Photosystem II dimer), [4] 2AXT, 1S5L, 1W5C, 1ILX, 1FE1, 1IZL.
Photosynthesis is a process where light is absorbed or harvested by pigment protein complexes which are able to turn sunlight into energy. [5] Absorption of a photon by a molecule takes place when pigment protein complexes harvest sunlight leading to electronic excitation delivered to the reaction centre where the process of charge separation can take place.
P680 + is the strongest biological oxidizing agent known, with an estimated redox potential of ~1.3 V. [3] This makes it possible to oxidize water during oxygenic photosynthesis. P680 + recovers its lost electron by oxidizing water via the oxygen-evolving complex , which regenerates P680.