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Suffix arrays are closely related to suffix trees: . Suffix arrays can be constructed by performing a depth-first traversal of a suffix tree. The suffix array corresponds to the leaf-labels given in the order in which these are visited during the traversal, if edges are visited in the lexicographical order of their first character.
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You can find the following characteristics in a suffix tree that uses Ukkonen's algorithm: Implicit suffix tree T i+1 is built on top of implicit suffix tree T i. At any given time, Ukkonen's algorithm builds the suffix tree for the characters seen so far and so it has on-line property, allowing the algorithm to have an execution time of O(n).
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In the array, each suffix is represented by an integer pair (,) which denotes the suffix starting from position in . In the case where different strings in have identical suffixes, in the generalized suffix array, those suffixes will occupy consecutive positions. However, for convenience, the exception can be made where repeats will not be listed.